AGIDB: Animal Genotype Imputation Database
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Sus scrofa (Pig)
Bos taurus (Cattle)
Gallus gallus (Chicken)
Ovis aries (Sheep)
Capra hircus (Goat)
Equus caballus (Horse)
Canis lupus familiaris (Dog)
Macaca mulatta (Macaque)
Mus musculus (Mouse)
Anas platyrhynchos (Mallard)
Oryctolagus cuniculus (Rabbit)
Felis catus (Cat)
Panthera leo (Lion)
Ailuropoda melanoleuca (Panda)
Camelus dromedarius (Arabian camel)
Ursus thibetanus (Black bear)
Balaenoptera musculus (Blue whale)
Anser cygnoides (Swan goose)
Panthera tigris (Tiger)
Loxodonta africana (Elephant)
Equus asinus (Donkey)
Coerebini (Darwin finches)
Cervidae (Deer)
Neovison vison (Mink)
Ursus maritimus (Polar bear)
Theropithecus gelada (Gelada baboon)
Bos grunniens (Yak)
Phoenicopteridae (Flamingo)
Canis lupus (Gray wolf)
Columba (Pigeon)
Gorilla (Gorilla)
Vicugna pacos (Alpaca)
Bubalus bubalis (Water buffalo)
Meleagris gallopavo (Turkey)
Vulpes (Fox)
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Cattle
Chicken
Sheep
Goat
Horse
Dog
Macaque
Mouse
Mallard
Rabbit
Pig
Cat
Lion
Panda
Arabian camel
Black bear
Blue whale
Swan goose
Tiger
Elephant
Donkey
Darwin finches
Deer
Mink
Polar bear
Gelada baboon
Yak
Flamingo
Gray wolf
Pigeon
Gorilla
Alpaca
Water buffalo
Turkey
Fox
Reference Panel : Pig
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Note: Information and images are from open source data.
NCBI Taxonomy ID
Genome version
Genome size
Assembly level
Number of chromosomes
Number of SNPs
Number of samples
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Sample Information : Pig
Sample Id
Breed
Group
Sex
Tissue
Locality
Bases
Mapping Rate
Depth
Coverage
Project
SRR11839173
Anqing Six-end-white
Asian southern domestic
NA
NA
NA
22413017858
NA
8.27
NA
NA
SRR11839174
Anqing Six-end-white
Asian southern domestic
NA
NA
NA
24833229124
NA
9.25
NA
NA
SRR11839175
Anqing Six-end-white
Asian southern domestic
NA
NA
NA
24078056566
NA
8.83
NA
NA
SRR11839176
Anqing Six-end-white
Asian southern domestic
NA
NA
NA
23879478156
NA
8.77
NA
NA
SRR11839177
Anqing Six-end-white
Asian southern domestic
NA
NA
NA
23239957128
NA
8.5
NA
NA
SRR11839178
Anqing Six-end-white
Asian southern domestic
NA
NA
NA
25600904970
NA
9.43
NA
NA
SRR11839179
Anqing Six-end-white
Asian southern domestic
NA
NA
NA
21946859932
NA
8.12
NA
NA
SRR11839180
Anqing Six-end-white
Asian southern domestic
NA
NA
NA
23933939590
NA
8.77
NA
NA
SRR11839181
Anqing Six-end-white
Asian southern domestic
NA
NA
NA
21550571054
NA
8.06
NA
NA
SRR11839182
Anqing Six-end-white
Asian southern domestic
NA
NA
NA
20988293174
NA
7.76
NA
NA
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